int iters, numGroups, numComp, counter;
vector< vector<double> > rScores; //vector<weighted scores for random trees.> each group comb has an entry
vector< vector<double> > uScores; //vector<weighted scores for user trees.> each group comb has an entry
- vector< map<float, float> > rScoreFreq; //map <weighted score, number of random trees with that score.> -vector entry for each combination.
- vector< map<float, float> > rCumul; //map <weighted score, cumulative percentage of number of random trees with that score or higher.> -vector entry for each c
- map<float, float> validScores; //map contains scores from random
+ vector< map<double, double> > rScoreFreq; //map <weighted score, number of random trees with that score.> -vector entry for each combination.
+ vector< map<double, double> > rCumul; //map <weighted score, cumulative percentage of number of random trees with that score or higher.> -vector entry for each c
+ map<double, double> validScores; //map contains scores from random
bool abort, phylip, random, includeRoot, subsample, consensus;
string groups, itersString, outputForm, treefile, groupfile, namefile, countfile;