modified makefile and sensspeccommand files

[mothur.git] / trimseqscommand.h

diff --git a/trimseqscommand.h b/trimseqscommand.h
index b5357b38e1e3bf892ef7f0cd9ffcfb7b7de4ec8a..fefe53490cc4b0c1275a006c0946f022c24e366a 100644 (file)
--- a/trimseqscommand.h
+++ b/trimseqscommand.h
@@ -47,6 +47,7 @@ private:
        bool flip, allFiles, qtrim;
        int numFPrimers, numRPrimers, maxAmbig, maxHomoP, minLength, maxLength, qThreshold, qAverage, processors, tdiffs, bdiffs, pdiffs, comboStarts;
        vector<string> revPrimer, outputNames;
+       set<string> filesToRemove;
        map<string, int> barcodes;
        vector<string> groupVector;
        map<string, int> primers;