fixed trim.seqs group counts by adding back in the primer group

[mothur.git] / trimseqscommand.h

diff --git a/trimseqscommand.h b/trimseqscommand.h
index d43eaa484aad5be4403d7967a6abda1e066a127c..d40cfe3c5604d66009ba22b568b0df71f3688faa 100644 (file)
--- a/trimseqscommand.h
+++ b/trimseqscommand.h
@@ -69,6 +69,7 @@ private:
        map<string, int> groupToIndex;
        vector<string> primerNameVector;        //needed here?
        vector<string> barcodeNameVector;       //needed here?
+       map<string, int> groupCounts;  
 
        vector<int> processIDS;   //processid
        vector<linePair*> lines;