readMatrix->setCutoff(cutoff);
ct = NULL;
+ nameMap = NULL;
if(namefile != ""){
nameMap = new NameAssignment(namefile);
nameMap->readMap();
ct = new CountTable();
ct->readTable(countfile);
readMatrix->read(ct);
+ }else {
+ readMatrix->read(nameMap);
}
list = readMatrix->getListVector();