vector<string> setParameters();
string getCommandName() { return "system"; }
string getCommandCategory() { return "General"; }
- string getHelpString();
+ string getHelpString();
+ string getOutputPattern(string){ return ""; }
string getCitation() { return "http://www.mothur.org/wiki/System"; }
- string getDescription() { return "excute system commands from within mothur"; }
+ string getDescription() { return "execute system commands from within mothur"; }
int execute();
void help() { m->mothurOut(getHelpString()); }