changed reading of name file to use buffered reads. note the splitAtWhiteSpace functi...

[mothur.git] / subsamplecommand.h

diff --git a/subsamplecommand.h b/subsamplecommand.h
index 39d3c375268b4712cdb5cc2297179ca5dff27978..7235a7b68ec569412bb97d1b98f076ff3b439bdb 100644 (file)
--- a/subsamplecommand.h
+++ b/subsamplecommand.h
@@ -45,13 +45,12 @@ private:
        vector<string> names;
        map<string, vector<string> > nameMap;
        
-       int eliminateZeroOTUS(vector<SharedRAbundVector*>&);
        int getSubSampleShared();
        int getSubSampleList();
        int getSubSampleRabund();
        int getSubSampleSabund();
        int getSubSampleFasta();
-       int processShared(vector<SharedRAbundVector*>&, ofstream&);
+       int processShared(vector<SharedRAbundVector*>&);
        int processRabund(RAbundVector*&, ofstream&);
        int processSabund(SAbundVector*&, ofstream&);
        int processList(ListVector*&, ofstream&, set<string>&);