a few fixes, and a program to tabulate quality scores

[fastq-tools.git] / src / fastq-uniq.c

diff --git a/src/fastq-uniq.c b/src/fastq-uniq.c
index 32d344e29e1abfd10fa44203b1d94c1861fd8974..2e507622ddb38ebb0bcc97bd9b9a7c403d9ddf2e 100644 (file)
--- a/src/fastq-uniq.c
+++ b/src/fastq-uniq.c
@@ -13,6 +13,7 @@
 #include "hash.h"
 #include "parse.h"
 #include <string.h>
+#include <inttypes.h>
 #include <zlib.h>
 #include <getopt.h>
 
@@ -84,7 +85,7 @@ void print_hash_table(FILE* fout, hash_table* T)
 
     size_t i;
     for (i = 0; i < T->m; i++) {
-        fprintf(fout, ">unique-read-%07zu (%zu copies)\n", i, S[i]->count);
+        fprintf(fout, ">unique-read-%07zu (%"PRIu32" copies)\n", i, S[i]->count);
         fwrite(S[i]->value, S[i]->len, sizeof(char), fout);
         fprintf(fout, "\n");
     }