#include "sharedsabundvector.h"
#include "sharedrabundfloatvector.h"
#include "rabundvector.hpp"
-#include "groupmap.h"
+//#include "groupmap.h"
/* This class is a child to datavector. It represents OTU information at a certain distance.
It is similiar to an rabundvector except each member of data knows which group it belongs to.
An individual which knows the OTU from which it came,
the group it is in and its abundance. */
-class GlobalData;
+//class GlobalData;
class SharedRAbundVector : public DataVector {
int getMaxRank();
string getGroup();
void setGroup(string);
+ string getBinLabel();
+ void setBinLabel(string);
int getGroupIndex();
void setGroupIndex(int);
vector<individual>::reverse_iterator rend();
void print(ostream&);
+ void printHeaders(ostream&);
RAbundVector getRAbundVector();
RAbundVector getRAbundVector2();
private:
vector<individual> data;
vector<SharedRAbundVector*> lookup;
- GlobalData* globaldata;
- GroupMap* groupmap;
+ //GlobalData* globaldata;
+ //GroupMap* groupmap;
int maxRank;
int numBins;
int numSeqs;