/***********************************************************************/
-EstOutput JAbund::getValues(SharedRAbundVector* shared1, SharedRAbundVector* shared2) {
+EstOutput JAbund::getValues(vector<SharedRAbundVector*> shared) {
try {
EstOutput UVest;
UVest.resize(2,0);
data.resize(1,0);
- UVest = uv->getUVest(shared1, shared2);
+ UVest = uv->getUVest(shared);
//UVest[0] is Uest UVest[1] is Vest
data[0] = (UVest[0] * UVest[1]) / ((float)(UVest[0] + UVest[1] - (UVest[0] * UVest[1])));
-
+ if(data[0] > 1){data[0] = 1; }
if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
return data;
}
catch(exception& e) {
- cout << "Standard Error: " << e.what() << " has occurred in the JAbund class Function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+ m->errorOut(e, "JAbund", "getValues");
exit(1);
}
- catch(...) {
- cout << "An unknown error has occurred in the JAbund class Function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
}
/***********************************************************************/