void printSharedData(vector<SharedRAbundVector*>);
void createMisMatchFile();
bool isValidGroup(string, vector<string>);
+ void eliminateZeroOTUS(vector<SharedRAbundVector*>&);
GlobalData* globaldata;
ReadOTUFile* read;
vector<string> groups;
ofstream out;
string filename, fileroot;
- bool firsttime;
+ bool firsttime, pickedGroups;
map<string, ofstream*> filehandles;
map<string, ofstream*>::iterator it3;