ReadOTUFile* read;
SharedListVector* SharedList;
InputData* input;
- //map<string, SharedRAbundVector*>::iterator it;
- //vector<SharedRAbundVector*> lookup;
+ GroupMap* groupMap;
ofstream out;
- string filename;
+ string filename, fileroot;
bool firsttime;
+ map<string, ofstream*> filehandles;
+ map<string, ofstream*>::iterator it3;
};