m->mothurOut(output + " directory does not exist or is not writable."); m->mothurOutEndLine();
}else{
out.close();
- remove(outTemp.c_str());
+ m->mothurRemove(outTemp);
m->mothurOut("outputDir=" + output); m->mothurOutEndLine();
commandFactory->setOutputDirectory(output);
}
m->mothurOut(input + " directory does not exist or is not writable."); m->mothurOutEndLine();
}else{
in.close();
- remove(inTemp.c_str());
+ m->mothurRemove(inTemp);
m->mothurOut("inputDir=" + input); m->mothurOutEndLine();
commandFactory->setInputDirectory(input);
}