string getCommandName() { return "set.current"; }
string getCommandCategory() { return "General"; }
string getHelpString();
+ string getCitation() { return "http://www.mothur.org/wiki/Set.current"; }
int execute();
void help() { m->mothurOut(getHelpString()); }
vector<string> types;
string accnosfile, phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, designfile, taxonomyfile;
- string orderfile, treefile, sharedfile, ordergroupfile, relabundfile, fastafile, qualfile, sfffile, oligosfile;
+ string orderfile, treefile, sharedfile, ordergroupfile, relabundfile, fastafile, qualfile, sfffile, oligosfile, processors, flowfile;
};