//allow user to run help
if(option == "help") { help(); abort = true; calledHelp = true; }
+ else if(option == "citation") { citation(); abort = true; calledHelp = true;}
else {
string temp;
lineLabel = validParameter.validFile(parameters, "label", false); if (lineLabel == "not found") { lineLabel = ""; }
- sensSpecFileName = listFile.substr(0,listFile.find_last_of('.')) + ".sensspec";
+ sensSpecFileName = outputDir + m->getRootName(m->getSimpleName(listFile)) + ".sensspec";
}
}
catch(exception& e) {