#include "mothur.h"
#include "command.hpp"
#include "globaldata.hpp"
-#include "readfasta.h"
-#include "readnexus.h"
-#include "readclustal.h"
-#include "readseqsphylip.h"
-#include <set>
-
-using namespace std;
class ScreenSeqsCommand : public Command {
int execute();
private:
void screenNameGroupFile(set<string>);
- int numSeqs;
+ void screenGroupFile(set<string>);
+
GlobalData* globaldata;
- ReadSeqs* readSeqs;
- SequenceDB* db;
};
#endif