while(!inputGroups.eof()){
if (m->control_pressed) { goodGroupOut.close(); inputGroups.close(); m->mothurRemove(goodGroupFile); return 0; }
- inputGroups >> seqName; m->gobble(inputGroups); inputGroups >> group;
+ inputGroups >> seqName; m->gobble(inputGroups); inputGroups >> group; m->gobble(inputGroups);
it = badSeqNames.find(seqName);
if(it != badSeqNames.end()){
else{
goodGroupOut << seqName << '\t' << group << endl;
}
- m->gobble(inputGroups);
}
if (m->control_pressed) { goodGroupOut.close(); inputGroups.close(); m->mothurRemove(goodGroupFile); return 0; }