]> git.donarmstrong.com Git - mothur.git/blobdiff - removeotulabelscommand.h
added dereplicate parameter to chimera.slayer and chimera.persues. added minnumsample...
[mothur.git] / removeotulabelscommand.h
index da2441dd32039ee4574df10a8ed8c9493f168f4d..03d2da3392443f3ebf70a60a1b4b318fa5b24e8a 100644 (file)
@@ -23,7 +23,9 @@ public:
     vector<string> setParameters();
     string getCommandName()                    { return "remove.otulabels";          }
     string getCommandCategory()                { return "OTU-Based Approaches";        } 
-    string getHelpString();    
+    
+       string getHelpString(); 
+    string getOutputPattern(string);   
     string getCitation() { return "http://www.mothur.org/wiki/Get.otulabels"; }
     string getDescription()            { return "Can be used with output from classify.otu, otu.association, or corr.axes to remove specific otus."; }
     
@@ -39,8 +41,6 @@ private:
     int readClassifyOtu();
     int readOtuAssociation();
     int readCorrAxes();
-    int readAccnos();
-    
 };
 
 /**************************************************************************************************/