string getCommandCategory() { return "Phylotype Analysis"; }
string getHelpString();
string getCitation() { return "http://www.mothur.org/wiki/Remove.lineage"; }
-
+ string getDescription() { return "removes sequences from a list, fasta, name, group, alignreport or taxonomy file from a given taxonomy or set of taxonomies"; }
+
int execute();
void help() { m->mothurOut(getHelpString()); }
int readAlign();
int readList();
int readTax();
- string removeConfidences(string);
vector< map<string, float> > getTaxons(string);
};