changed read.shared to read.list and incorporated the shared and parselist commands...

[mothur.git] / readsabundfilecommand.h

diff --git a/readsabundfilecommand.h b/readsabundfilecommand.h
deleted file mode 100644 (file)
index 8e2526b..0000000
--- a/readsabundfilecommand.h
+++ /dev/null
@@ -1,38 +0,0 @@
-#ifndef READSABUNDFILECOMMAND_H
-#define READSABUNDFILECOMMAND_H
-/*
- *  readsabundfilecommand.h
- *  Dotur
- *
- *  Created by Sarah Westcott on 1/2/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include <Carbon/Carbon.h>
-#include <iostream>
-#include <fstream>
-#include "command.hpp"
-#include "readmatrix.hpp"
-#include "inputdata.h"
-
-/* The read.sabund command parameter options are sabundfile and orderfile.  
-The read.sabund command should be in the following format: 
-read.sabund(sabundfile=yourSabundFile, orderfile=yourOrderFile). The sabundfile parameter is required.*/
-
-class GlobalData;
-
-class ReadSAbundFileCommand : public Command {
-public:
-       ReadSAbundFileCommand();
-       ~ReadSAbundFileCommand();
-       int execute();
-       
-private:
-       GlobalData* globaldata;
-       ReadMatrix* read;
-       InputData* input;
-       string filename;
-};
-
-#endif
\ No newline at end of file