+++ /dev/null
-/*
- * readrabundfilecommand.cpp
- * Dotur
- *
- * Created by Sarah Westcott on 1/2/09.
- * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "readrabundfilecommand.h"
-
-//**********************************************************************************************************************
-ReadRAbundFileCommand::ReadRAbundFileCommand(){
- try {
- globaldata = GlobalData::getInstance();
- filename = globaldata->inputFileName;
- read = new ReadPhilFile(filename);
- }
- catch(exception& e) {
- cout << "Standard Error: " << e.what() << " has occurred in the ReadRAbundFileCommand class Function ReadRAbundFileCommand. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
- catch(...) {
- cout << "An unknown error has occurred in the ReadRAbundFileCommand class function ReadRAbundFileCommand. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
-}
-
-//**********************************************************************************************************************
-
-ReadRAbundFileCommand::~ReadRAbundFileCommand(){
- delete read;
-}
-
-//**********************************************************************************************************************
-
-int ReadRAbundFileCommand::execute(){
- try {
- read->read(&*globaldata);
- return 0;
- }
- catch(exception& e) {
- cout << "Standard Error: " << e.what() << " has occurred in the ReadRAbundFileCommand class Function execute. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
- catch(...) {
- cout << "An unknown error has occurred in the ReadRAbundFileCommand class function execute. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
-}
-//**********************************************************************************************************************