fixing minor bugs

[mothur.git] / readotucommand.h

diff --git a/readotucommand.h b/readotucommand.h
index 586e6ef36e5ca3ab015db96b493c191612a9330a..e07dadc1713989455a7fa1f35b6cdaa6767abf6c 100644 (file)
--- a/readotucommand.h
+++ b/readotucommand.h
@@ -40,15 +40,13 @@ public:
        
 private:
        GlobalData* globaldata;
-       ReadOTUFile* read;
+       //ReadOTUFile* read;
        InputData* input;
        Command* shared;
        Command* parselist;
        GroupMap* groupMap;
        string filename, listfile, orderfile, sharedfile, line, label, groupfile, sabundfile, rabundfile, format;
-       OptionParser* parser;
-       map<string, string> parameters;
-       map<string, string>::iterator it;
+
        bool abort, allLines;
        set<int> lines; //hold lines to be used
        set<string> labels; //holds labels to be used