modified read.otu and shared command

[mothur.git] / readotucommand.h

diff --git a/readotucommand.h b/readotucommand.h
index c38d0a5f3d38916681db8b254fe11b5c9eec03f2..6ec35412c3c82206bef933787c820ca36e2158d2 100644 (file)
--- a/readotucommand.h
+++ b/readotucommand.h
@@ -14,7 +14,6 @@
 #include "inputdata.h"
 #include "groupmap.h"
 #include "sharedcommand.h"
-#include "parselistcommand.h"
 
 /* The read.otu must be run before you execute a collect.single, rarefaction.single, summary.single, 
 collect.shared, rarefaction.shared or summary.shared command. Mothur will generate a .list, .rabund and .sabund 
@@ -40,10 +39,9 @@ public:
        
 private:
        GlobalData* globaldata;
-       ReadOTUFile* read;
+       //ReadOTUFile* read;
        InputData* input;
        Command* shared;
-       Command* parselist;
        GroupMap* groupMap;
        string filename, listfile, orderfile, sharedfile, line, label, groupfile, sabundfile, rabundfile, format;