class ReadDistCommand : public Command {
public:
- ReadDistCommand();
+ ReadDistCommand(string);
~ReadDistCommand();
int execute();
+ void help();
private:
GlobalData* globaldata;
ReadMatrix* read;
FullMatrix* matrix;
GroupMap* groupMap;
- string filename, format, method;
+ string distFileName, format, method;
+ string phylipfile, columnfile, namefile, groupfile, outputDir;
NameAssignment* nameMap;
+
+ bool abort, sim;
+
};
#endif