pat's mod to trim.seqs

[mothur.git] / readdistcommand.h

diff --git a/readdistcommand.h b/readdistcommand.h
index 868d72e6bd5184b11253dc5c9aacded459f0ee3d..937ca3f0797c58bc24dc3a239ac5f7c0e4624339 100644 (file)
--- a/readdistcommand.h
+++ b/readdistcommand.h
@@ -39,10 +39,10 @@ private:
        FullMatrix* matrix;
        GroupMap* groupMap;
        string distFileName, format, method;
-       string phylipfile, columnfile, namefile, groupfile;
+       string phylipfile, columnfile, namefile, groupfile, outputDir;
        NameAssignment* nameMap;
 
-       bool abort;
+       bool abort, sim;
 
 };