*** empty log message ***

[mothur.git] / readdistcommand.h

diff --git a/readdistcommand.h b/readdistcommand.h
index 937ca3f0797c58bc24dc3a239ac5f7c0e4624339..2f05ddbd3169d4cd4f204245ca2a0dd88571cb8e 100644 (file)
--- a/readdistcommand.h
+++ b/readdistcommand.h
@@ -27,7 +27,12 @@ class GlobalData;
 class ReadDistCommand : public Command {
 public:
        ReadDistCommand(string);
+       ReadDistCommand() { abort = true; calledHelp = true; }
        ~ReadDistCommand();
+       vector<string> getRequiredParameters();
+       vector<string> getValidParameters();
+       vector<string> getRequiredFiles();
+       map<string, vector<string> > getOutputFiles() { return outputTypes; }
        int execute();
        void help();
        
@@ -41,6 +46,8 @@ private:
        string distFileName, format, method;
        string phylipfile, columnfile, namefile, groupfile, outputDir;
        NameAssignment* nameMap;
+       vector<string> outputNames;
+       map<string, vector<string> > outputTypes;
 
        bool abort, sim;