/***********************************************************************/
-ReadCluster::ReadCluster(string distfile, float c){
+ReadCluster::ReadCluster(string distfile, float c, string o){
globaldata = GlobalData::getInstance();
m = MothurOut::getInstance();
distFile = distfile;
cutoff = c;
+ outputDir = o;
}
/***********************************************************************/
if (m->control_pressed) { return 0; }
- OutPutFile = sortFile(distFile);
+ OutPutFile = sortFile(distFile, outputDir);
return 0;