fixed valid parameters to include shared parameter for read.shared command.

[mothur.git] / rarefactsharedcommand.h

diff --git a/rarefactsharedcommand.h b/rarefactsharedcommand.h
index 1d877106bda0678fadfd99fff7e17f9766daa841..54a6a95024d0fd97f279be2e50f3e31906f308a4 100644 (file)
--- a/rarefactsharedcommand.h
+++ b/rarefactsharedcommand.h
@@ -9,10 +9,6 @@
  *
  */
 
-#include <Carbon/Carbon.h>
-#include <iostream>
-#include <fstream>
-#include <vector>
 #include "command.hpp"
 #include "sharedordervector.h"
 #include "sharedlistvector.h"
@@ -20,6 +16,7 @@
 #include "rarefact.h"
 #include "display.h"
 #include "readmatrix.hpp"
+#include "validcalculator.h"
 
 /* The rarefaction.shared() command:
        The rarefaction command generates a rarefaction curve from a given file representing several groups.  
@@ -48,10 +45,12 @@ private:
        ReadMatrix* read;
        SharedOrderVector* order;
        InputData* input;
+       ValidCalculators* validCalculator;
        Rarefact* rCurve;
        vector<Display*> rDisplays;
        int freq, nIters;
+       string format;
 
 };
 
-#endif
\ No newline at end of file
+#endif