*/
#include "command.hpp"
-#include "sharedordervector.h"
-#include "sharedlistvector.h"
#include "inputdata.h"
#include "rarefact.h"
#include "display.h"
-#include "readmatrix.hpp"
+#include "readotu.h"
#include "validcalculator.h"
-#include "sharedutilities.h"
/* The rarefaction.shared() command:
The rarefaction command generates a rarefaction curve from a given file representing several groups.
private:
GlobalData* globaldata;
- SharedUtil* util;
- SharedListVector* SharedList;
- ReadMatrix* read;
- SharedOrderVector* order;
+ ReadOTUFile* read;
+ vector<SharedRAbundVector*> lookup;
InputData* input;
ValidCalculators* validCalculator;
Rarefact* rCurve;