This is mothur v 1.2.0 - the April ~24, 2009 release

[mothur.git] / rarefactcommand.h

diff --git a/rarefactcommand.h b/rarefactcommand.h
index c81eb6fea19a3808ec93f0cdda1c779719947585..5ac970ee8542b7d0793734d56d813afe506e1e09 100644 (file)
--- a/rarefactcommand.h
+++ b/rarefactcommand.h
@@ -9,15 +9,12 @@
  *
  */
 
-#include <iostream>
-#include <fstream>
-#include <vector>
 #include "command.hpp"
 #include "ordervector.hpp"
 #include "inputdata.h"
 #include "rarefact.h"
 #include "display.h"
-#include "readmatrix.hpp"
+#include "readotu.h"
 #include "validcalculator.h"
 
 
@@ -47,12 +44,12 @@ public:
 private:
        GlobalData* globaldata;
        vector<Display*> rDisplays;
-       ReadMatrix* read;
+       ReadOTUFile* read;
        OrderVector* order;
        InputData* input;
        ValidCalculators* validCalculator;
        Rarefact* rCurve;
-       int freq, nIters;
+       int freq, nIters, abund;
 };
 
 #endif