#include "calculator.h"
#include "fileoutput.h"
#include "display.h"
-#include <vector>
-
-using namespace std;
/***********************************************************************/
class RareDisplay : public Display {
public:
- RareDisplay(Calculator* calc, FileOutput* file) : estimate(calc), output(file), nIters(1),
- tempInName(getPathName(output->getFileName()) + ".tempin."+ getSimpleName(output->getFileName())), tempOutName(getPathName(output->getFileName()) + ".tempout."+ getSimpleName(output->getFileName())) {};
+ RareDisplay(Calculator* calc, FileOutput* file) : estimate(calc), output(file), nIters(1), index(0) {};
~RareDisplay() { delete estimate; delete output; };
void init(string);
void reset();
void update(SAbundVector*);
- void update(SharedRAbundVector* shared1, SharedRAbundVector* shared2, int numSeqs, int numGroupComb);
+ void update(vector<SharedRAbundVector*> shared, int numSeqs, int numGroupComb);
void close();
+ bool isCalcMultiple() { return estimate->getMultiple(); }
+
+ void outputTempFiles(string);
+ void inputTempFiles(string);
private:
Calculator* estimate;
FileOutput* output;
string label;
- int nIters;
- string tempInName, tempOutName;
- ifstream tempInFile;
- ofstream tempOutFile;
-
+ vector<int> seqs;
+ vector<double> results;
+ vector<double> var;
+ int index, nIters;
};
#endif