worked on trim.seqs - added in the groupfiles for allfiles=t, cleaned up the outputNa...

[mothur.git] / qualityscores.h

diff --git a/qualityscores.h b/qualityscores.h
index 8f2105a1d095bfe94502d28ae387b89e8da9ed7c..4453145f690b9a8be8b8da1bbf78fd5626d5fa71 100644 (file)
--- a/qualityscores.h
+++ b/qualityscores.h
@@ -20,8 +20,9 @@
 class QualityScores {
 public:
        QualityScores();
-       QualityScores(ifstream&, int);
+       QualityScores(ifstream&);
        string getName();
+       vector<int> getQualityScores() { return qScores; }
        void printQScores(ofstream&);
        void trimQScores(int, int);
        void flipQScores();