int r3 = -1;
int r1Ind = 0;
int r3Ind = 0;
- int sumSpec = 0;
- int iqSum = 0;
+ double sumSpec = 0;
+ double iqSum = 0;
for(int i = 1; i < rank->size(); i++) {
if(r1 != -1 && r3 != -1)
i = rank->size();
}
double qstat = (.5*r1 + iqSum + .5*r3)/log((double)r3Ind/r1Ind);
- //cout << "QStat:\nQStatistic = " << qstat << "\n\n";
data[0] = qstat;
if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
return data;
}
catch(exception& e) {
- cout << "Standard Error: " << e.what() << " has occurred in the QStat class Function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+ m->errorOut(e, "QStat", "getValues");
exit(1);
}
- catch(...) {
- cout << "An unknown error has occurred in the QStat class function getValues. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
- exit(1);
- }
}
/***********************************************************************/