vector<string> setParameters();
string getCommandName() { return "pipeline.pds"; }
string getCommandCategory() { return "Hidden"; }
- string getOutputFileNameTag(string, string) { return ""; }
string getHelpString();
- string getCitation() { return "http://www.mothur.org/wiki/Pipeline.pds"; }
+ string getOutputPattern(string) { return ""; }
+ string getCitation() { return "Schloss PD, Gevers D, Westcott SL (2011). Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies. PLoS ONE. 6:e27310.\nhttp://www.mothur.org/wiki/Pipeline.pds"; }
string getDescription() { return "pat's pipeline"; }