if (m->control_pressed) { for (int i = 0; i < outputNames.size(); i++) { remove(outputNames[i].c_str()); } return 0; }
- phylo.setTotalGroupBranchLengths(trees[i]);
+ //phylo.setTotalGroupBranchLengths(trees[i]);
string outFile = outputDir + getRootName(getSimpleName(globaldata->getTreeFile())) + toString(i+1) + ".phylo.diversity";
if (rarefy) { outFile += ".rarefaction"; }