modified bin.seqs and get.oturep commands to include use of a groupfile if provided...

[mothur.git] / parsimony.h

diff --git a/parsimony.h b/parsimony.h
index ebe3d8d89d4ecf2174dc84f8796245a07f4384c9..a22f5bda875b467fee13b369c9a1c639ad5e5662 100644 (file)
--- a/parsimony.h
+++ b/parsimony.h
@@ -23,9 +23,11 @@ class Parsimony : public TreeCalculator  {
                Parsimony(TreeMap* t) : tmap(t) {};
                ~Parsimony() {};
                EstOutput getValues(Tree*);
+               EstOutput getValues(Tree*, string, string) { return data; };
                
        private:
                GlobalData* globaldata;
+               Tree* copyTree;
                EstOutput data;
                TreeMap* tmap;
                map<string, int>::iterator it;