major change to the tree class to use the count table class instead of tree map....

[mothur.git] / otuhierarchycommand.h

diff --git a/otuhierarchycommand.h b/otuhierarchycommand.h
index 342b5aa52804dda54bea8da6e8c1b4276d089290..ad6da0cf529121202b3bfc5d1c1d6bdc166cba16 100644 (file)
--- a/otuhierarchycommand.h
+++ b/otuhierarchycommand.h
@@ -24,8 +24,11 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "otu.hierarchy";                       }
        string getCommandCategory()             { return "OTU-Based Approaches";        }
+       string getOutputFileNameTag(string, string);
        string getHelpString(); 
        string getCitation() { return "http://www.mothur.org/wiki/Otu.hierarchy"; }
+       string getDescription()         { return "relates OTUs at different distances"; }
+
        
        int execute(); 
        void help() { m->mothurOut(getHelpString()); }