pat's minor edits to distance calculations

[mothur.git] / optionparser.cpp

diff --git a/optionparser.cpp b/optionparser.cpp
index 2de1621bcb9a73ac9c17b02384ee6d9b0f3f5d49..c50d5a3107bb8c88f7dc251831873cfdd0d68e2b 100644 (file)
--- a/optionparser.cpp
+++ b/optionparser.cpp
@@ -13,7 +13,7 @@
 
 OptionParser::OptionParser(string option) {
        try {
-               
+               m = MothurOut::getInstance();
                if (option != "") {
                        
                        string key, value;              
@@ -30,11 +30,7 @@ OptionParser::OptionParser(string option) {
                }
        }
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the OptionParser class Function parse. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the OptionParser class function parse. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               m->errorOut(e, "OptionParser", "parse");
                exit(1);
        }
 }