indicator command

[mothur.git] / mothurout.h

diff --git a/mothurout.h b/mothurout.h
index fb5b432f549de88a1fa519bc83541649a0882389..7bbd315b0420ce2a4d42d759aa244303f4998f9d 100644 (file)
--- a/mothurout.h
+++ b/mothurout.h
@@ -41,7 +41,8 @@ class MothurOut {
                vector<string> Treenames;
                map<string, string> names;
                vector<string> namesOfGroups;
-               string saveNextLabel, argv;
+               string saveNextLabel, argv, sharedHeaderMode;
+               bool printedHeaders;
                
                //functions from mothur.h
                //file operations
@@ -98,6 +99,7 @@ class MothurOut {
                float ceilDist(float, int);
                float roundDist(float, int);
                unsigned int fromBase36(string);
+               int getRandomIndex(int); //highest
 
                int control_pressed;
                bool executing, runParse, jumble, gui;
@@ -179,6 +181,8 @@ class MothurOut {
                        processors = "1";
                        flowfile = "";
                        gui = false;
+                       printedHeaders = false;
+                       sharedHeaderMode = "";
                };
                ~MothurOut();