fixed bug with trim.seqs allfiles=t

[mothur.git] / mothurout.h

diff --git a/mothurout.h b/mothurout.h
index f6f505dce6409db716561b061a2e66eda3efae5a..7b71fcfbd48c823db529f0bc8d1a54f78422543d 100644 (file)
--- a/mothurout.h
+++ b/mothurout.h
@@ -44,6 +44,7 @@ class MothurOut {
                //functions from mothur.h
                //file operations
                vector<unsigned long int> divideFile(string, int&);
+               int divideFile(string, int&, vector<string>&);
                vector<unsigned long int> setFilePosEachLine(string, int&);
                vector<unsigned long int> setFilePosFasta(string, int&);
                string sortFile(string, string);
@@ -65,6 +66,7 @@ class MothurOut {
                void gobble(istream&);
                void gobble(istringstream&);
                map<string, int> readNames(string);
+               int readNames(string, map<string, string>&);
                int readNames(string, vector<seqPriorityNode>&, map<string, string>&);
                
                //searchs and checks