added classify.shared command and random forest files. added count file to pcr.seqs...

[mothur.git] / mothurout.h

diff --git a/mothurout.h b/mothurout.h
index 33384034ae55ee7f11c72b48378fa59bfe29e16e..53d4250c771cdbdac15c715c44d97fabf0a92c1a 100644 (file)
--- a/mothurout.h
+++ b/mothurout.h
@@ -140,6 +140,7 @@ class MothurOut {
                void splitAtChar(string&, vector<string>&, char);
         void splitAtChar(string&, string&, char);
                int removeConfidences(string&);
+        string removeQuotes(string);
         string makeList(vector<string>&);
         bool isSubset(vector<string>, vector<string>); //bigSet, subset
                
@@ -150,6 +151,7 @@ class MothurOut {
                float roundDist(float, int);
                unsigned int fromBase36(string);
                int getRandomIndex(int); //highest
+        double getStandardDeviation(vector<int>&);
 
                int control_pressed;
                bool executing, runParse, jumble, gui, mothurCalling, debug;