* Copyright 2008 Patrick D. Schloss. All rights reserved.
*
*/
-#include <string>
-#include <iostream>
-#include <iomanip>
-#include <fstream>
-#include <sstream>
-#include <exception>
-
+
+#include "mothur.h"
#include "engine.hpp"
#include "globaldata.hpp"
int main(int argc, char *argv[]){
try {
- // srand(54321);
+ //srand(54321);
srand( (unsigned)time( NULL ) );
- Engine* dotur;
+ Engine* mothur;
bool bail = 0;
if(argc>1){
- dotur = new BatchEngine(argv[1]);
+ mothur = new BatchEngine(argv[1]);
}
else{
- dotur = new InteractEngine();
+ mothur = new InteractEngine();
}
- while(bail == 0) { bail = dotur->getInput(); }
+ while(bail == 0) { bail = mothur->getInput(); }
- delete dotur;
+ delete mothur;
return 0;
}