//**********************************************************************************************************************
int MGClusterCommand::execute(){
try {
- cout << "1" << endl;
if (abort == true) { if (calledHelp) { return 0; } return 2; }
//read names file
}
- list = new ListVector(nameMap->getListVector());
- RAbundVector* rabund = new RAbundVector(list->getRAbundVector());
+ //list = new ListVector(nameMap->getListVector());
+ //rabund = new RAbundVector(list->getRAbundVector());
if (m->control_pressed) { outputTypes.clear(); delete nameMap; delete read; delete list; delete rabund; return 0; }
m->mothurRemove(overlapFile);
}
- delete list;
- delete rabund;
+ delete list;
+ if (!large) {delete rabund;}
listFile.close();
sabundFile.close();
rabundFile.close();