added count file to cluster.classic and cluster.split. modified splitting classes...

[mothur.git] / mantelcommand.h

diff --git a/mantelcommand.h b/mantelcommand.h
index 224265bc3539a53e16b322847772b8fe2cdbc280..644d9b21ded9302bc8be1eff6b011b17fec278ac 100644 (file)
--- a/mantelcommand.h
+++ b/mantelcommand.h
@@ -22,8 +22,11 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "mantel";                                      }
        string getCommandCategory()             { return "Hypothesis Testing";          }
+       string getOutputFileNameTag(string, string);
        string getHelpString(); 
-       
+       string getCitation() { return "McCune B, Grace JB, Urban DL (2002). Analysis of ecological communities. MjM Software Design: Gleneden Beach, OR. \nLegendre P, Legendre L (1998). Numerical Ecology. Elsevier: New York. \nhttp://www.mothur.org/wiki/Mantel"; }
+       string getDescription()         { return "Mantel’s test for correlation between matrices"; }
+
        int execute();
        void help() { m->mothurOut(getHelpString()); }