for (int i = 0; i < fastaFileNames.size(); i++) {
+ if (m->control_pressed) { out.close(); remove(filename.c_str()); return 0; }
+
ifstream in;
openInputFile(fastaFileNames[i], in);
while (!in.eof()) {
- Sequence seq(in); gobble(in);
+ Sequence seq(in, "no align"); gobble(in);
+
+ if (m->control_pressed) { in.close(); out.close(); remove(filename.c_str()); return 0; }
if (seq.getName() != "") { out << seq.getName() << '\t' << groupsNames[i] << endl; }
}