CYGWIN_BUILD ?= no
USECOMPRESSION ?= no
MOTHUR_FILES="\"Enter_your_default_path_here\""
-RELEASE_DATE = "\"12/7/2011\""
-VERSION = "\"1.22.0\""
+RELEASE_DATE = "\"10/16/2013\""
+VERSION = "\"1.32.1\""
FORTAN_COMPILER = gfortran
+FORTRAN_FLAGS =
# Optimize to level 3:
CXXFLAGS += -O3
ifeq ($(strip $(64BIT_VERSION)),yes)
#if you are using centos uncomment the following lines
- CXX = g++44
+ #CXX = g++44
#if you are a mac user use the following line
-# TARGET_ARCH += -arch x86_64
+ TARGET_ARCH += -arch x86_64
#if you using cygwin to build Windows the following line
#CXX = x86_64-w64-mingw32-g++
#CC = x86_64-w64-mingw32-g++
+ #FORTAN_COMPILER = x86_64-w64-mingw32-gfortran
#TARGET_ARCH += -m64 -static
#if you are a linux user use the following line
- CXXFLAGS += -mtune=native -march=native -m64
+ #CXXFLAGS += -mtune=native -march=native
- CXXFLAGS += -DBIT_VERSION
+ CXXFLAGS += -DBIT_VERSION
endif
$(CXX) $(LDFLAGS) $(TARGET_ARCH) -o $@ $(OBJECTS) $(LIBS)
strip mothur
-
+
uchime:
cd uchime_src && ./mk && mv uchime .. && cd ..
fortranSource:
- ${FORTAN_COMPILER} -c *.f
+ ${FORTAN_COMPILER} -c $(FORTRAN_FLAGS) *.f
install : mothur
# cp mothur ../Release/mothur