have make contigs use \r instead of \n

[mothur.git] / makecontigscommand.cpp

diff --git a/makecontigscommand.cpp b/makecontigscommand.cpp
index e633a9c92a8b2647a97c1cf2bcf74ab6dc6a7bb0..d2ddc06e8af6b9ffa9ac783ca8e2b6f61a612f83 100644 (file)
--- a/makecontigscommand.cpp
+++ b/makecontigscommand.cpp
@@ -1448,7 +1448,7 @@ vector< vector<string> > MakeContigsCommand::readFastaFiles(unsigned long int& c
             }
                }
                //report progress
-               if((count) % 10000 != 0){       m->mothurOut(toString(count)); m->mothurOutEndLine();           }
+               if((count) % 10000 != 0){       m->mothurOut(toString(count)); m->mothurOut("\r");              }
         
         if (uniques.size() != 0) {
             for (itUniques = uniques.begin(); itUniques != uniques.end(); itUniques++) {