void readKmerDB(ifstream&);
int getCount(int); //returns number of sequences with that kmer number
vector<int> getSequencesWithKmer(int); //returns vector of sequences that contain kmer passed in
+ int getReversed(int); //returns reverse compliment kmerNumber
int getMaxKmer() { return maxKmer; }
- #ifdef USE_MPI
- int MPISend(int); //just sends kmersize
- int MPIRecv(int);
- #endif
-
private:
int kmerSize;