#ifndef INPUTDATA_H
#define INPUTDATA_H
-#include <iostream>
-#include <iomanip>
-#include <string>
-#include <fstream>
+#include "mothur.h"
#include "ordervector.hpp"
#include "sharedlistvector.h"
#include "sharedordervector.h"
OrderVector* getOrderVector();
SharedOrderVector* getSharedOrderVector();
SAbundVector* getSAbundVector();
+ RAbundVector* getRAbundVector();
+ vector<SharedRAbundVector*> getSharedRAbundVectors();
private:
string format;
OrderVector* output;
SharedOrderVector* SharedOrder;
SAbundVector* sabund;
+ RAbundVector* rabund;
map<string,int> orderMap;
};