#ifndef INPUTDATA_H
#define INPUTDATA_H
-#include <iostream>
-#include <iomanip>
-#include <string>
-#include <fstream>
+#include "mothur.h"
#include "ordervector.hpp"
+#include "sharedlistvector.h"
+#include "sharedordervector.h"
#include "listvector.hpp"
InputData(string, string, string);
~InputData();
ListVector* getListVector();
+ SharedListVector* getSharedListVector();
OrderVector* getOrderVector();
+ SharedOrderVector* getSharedOrderVector();
SAbundVector* getSAbundVector();
private:
ifstream fileHandle;
DataVector* input;
ListVector* list;
+ SharedListVector* SharedList;
OrderVector* output;
+ SharedOrderVector* SharedOrder;
SAbundVector* sabund;
map<string,int> orderMap;
};
-#endif
\ No newline at end of file
+#endif