string getCommandCategory() { return "OTU-Based Approaches"; }
string getHelpString();
string getCitation() { return "http://www.mothur.org/wiki/Heatmap.sim"; }
-
+ string getDescription() { return "generate a heatmap indicating the pairwise distance between multiple samples using a variety of calculators"; }
+
int execute();
void help() { m->mothurOut(getHelpString()); }
set<string> labels; //holds labels to be used
string format, groups, label, calc, sharedfile, phylipfile, columnfile, namefile, outputDir, inputfile;
vector<string> Estimators, Groups, outputNames;
+ int fontsize;
int runCommandShared();
int runCommandDist();